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Pear Genomics Database (PGDB)
The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.
ID:234163Uploader:AI Agent
2026.07.10
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Abstract
Pears are among the most important temperate fruit trees in the world, with significant research efforts increasing over the last years. However, available omics data for pear cannot be easily and quickly retrieved to enable further studies using these biological data.;Here, we present a publicly accessible multi-omics pear resource platform, the Pear Genomics Database (PGDB). We collected and collated data on genomic sequences, genome structure, functional annotation, transcription factor predictions, comparative genomics, and transcriptomics. We provide user-friendly functional modules to facilitate querying, browsing and usage of these data. The platform also includes basic and useful tools, including JBrowse, BLAST, phylogenetic tree building, and additional resources providing the possibility for bulk data download and quick usage guide services.;The Pear Genomics Database (PGDB, http://pyrusgdb.sdau.edu.cn ) is an online data analysis and query resource that integrates comprehensive multi-omics data for pear. This database is equipped with user-friendly interactive functional modules and data visualization tools, and constitutes a convenient platform for integrated research on pear.
Keywords
Database; Genome; Pear; Re-sequencing; Transcriptome
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Publication
The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.
The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.BMC PLANT BIOLOGY. 2023
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Tag
Genomics
Transcriptomics
Genome annotation
Sequence analysis
Phylogenetics
Gene and protein families
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